Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ebf3O08791 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ebf3O08791 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ebf3O08791 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ebf3O08791 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm11836-201ENSMUST00000121022 441 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm11675-201ENSMUST00000121873 832 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm13182-201ENSMUST00000122241 312 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Gm8492-201ENSMUST00000182375 987 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Mir6998-201ENSMUST00000183343 64 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm7593-201ENSMUST00000187246 644 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm38117-201ENSMUST00000194653 939 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gm43520-201ENSMUST00000197996 164 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.12□□□□□ -0.47
Ebf3O08791 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ebf3O08791 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ebf3O08791 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.12□□□□□ -0.47
Ebf3O08791 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf3O08791 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm12899-201ENSMUST00000120565 551 ntBASIC12.11□□□□□ -0.47
Ebf3O08791 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.11□□□□□ -0.47
Ebf3O08791 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm17931-201ENSMUST00000208132 634 ntBASIC12.11□□□□□ -0.47
Ebf3O08791 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ebf3O08791 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ebf3O08791 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf3O08791 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.11□□□□□ -0.47
Ebf3O08791 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.11□□□□□ -0.47
Ebf3O08791 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ebf3O08791 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.11□□□□□ -0.47
Ebf3O08791 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.11□□□□□ -0.47
Ebf3O08791 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.11□□□□□ -0.47
Ebf3O08791 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ebf3O08791 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ebf3O08791 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Ebf3O08791 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ebf3O08791 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms