Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm15196-201ENSMUST00000121406 482 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm37852-201ENSMUST00000193027 350 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm42779-201ENSMUST00000198807 406 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm9102-201ENSMUST00000219250 465 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
B020004C17RikJ3QP07 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Gm40879-201ENSMUST00000220759 612 ntBASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Capsl-202ENSMUST00000226688 739 ntBASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
B020004C17RikJ3QP07 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
B020004C17RikJ3QP07 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Gm11957-201ENSMUST00000118304 779 ntBASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.95□□□□□ -0.34
B020004C17RikJ3QP07 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms