Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54bE9PXC0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm12419-201ENSMUST00000116649 636 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm12795-201ENSMUST00000117594 539 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm12899-201ENSMUST00000120565 551 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Mir1901-201ENSMUST00000122616 78 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm25072-201ENSMUST00000175233 235 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm23153-201ENSMUST00000175323 313 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm28324-201ENSMUST00000187913 264 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm38210-201ENSMUST00000191944 809 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm37458-201ENSMUST00000194055 410 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm5982-201ENSMUST00000196234 512 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Olfr584-201ENSMUST00000098210 964 ntBASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54bE9PXC0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm9089-201ENSMUST00000122027 526 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Mir6998-201ENSMUST00000183343 64 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Mir8093-201ENSMUST00000185043 137 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm42518-201ENSMUST00000196277 938 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm42657-201ENSMUST00000201746 211 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm8342-201ENSMUST00000209839 757 ntBASIC11.5□□□□□ -0.57
Srp54bE9PXC0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Srp54bE9PXC0 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms