Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm11500-201ENSMUST00000118237 601 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm8459-201ENSMUST00000162504 760 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Mir6941-201ENSMUST00000184711 59 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.44□□□□□ -0.74
Shank1D3YZU1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Shank1D3YZU1 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm6630-201ENSMUST00000119199 454 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm26368-201ENSMUST00000157826 118 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm17214-201ENSMUST00000164501 541 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm43380-201ENSMUST00000200421 220 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Arhgef33-210ENSMUST00000225548 456 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.43□□□□□ -0.74
Shank1D3YZU1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Shank1D3YZU1 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.42□□□□□ -0.74
Shank1D3YZU1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Shank1D3YZU1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Shank1D3YZU1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms