Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Upk3aQ9JKX8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm12247-201ENSMUST00000117585 670 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm15352-201ENSMUST00000118696 270 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm26461-201ENSMUST00000175064 290 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm7504-201ENSMUST00000201449 424 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm2517-201ENSMUST00000215651 348 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Olfr584-201ENSMUST00000098210 964 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Upk3aQ9JKX8 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm11956-201ENSMUST00000119525 512 ntBASIC11.16□□□□□ -0.62
Upk3aQ9JKX8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms