Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Tubb3Q9ERD7 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm15711-201ENSMUST00000118889 535 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm12380-201ENSMUST00000119012 544 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm27552-201ENSMUST00000183351 62 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm27844-201ENSMUST00000183613 62 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Lect2-202ENSMUST00000225183 823 ntBASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Tubb3Q9ERD7 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.55
Tubb3Q9ERD7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Tubb3Q9ERD7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.58□□□□□ -0.55
Tubb3Q9ERD7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.58□□□□□ -0.55
Tubb3Q9ERD7 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm38314-201ENSMUST00000195709 625 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Tubb3Q9ERD7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms