Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rnf6Q9DBU5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm43984-201ENSMUST00000204572 2864 ntBASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm7857-201ENSMUST00000117957 358 ntBASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gm11450-201ENSMUST00000121144 333 ntBASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rnf6Q9DBU5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm3329-201ENSMUST00000159873 556 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm18056-201ENSMUST00000207670 568 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm18061-201ENSMUST00000208350 562 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm18063-201ENSMUST00000208529 568 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm18052-201ENSMUST00000208750 559 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm10254-201ENSMUST00000052888 867 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rnf6Q9DBU5 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms