Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm24514-201ENSMUST00000174961 285 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm43852-201ENSMUST00000202098 917 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.29■□□□□ 0.04
U2af1Q9D883 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
U2af1Q9D883 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
U2af1Q9D883 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm43727-201ENSMUST00000198021 2647 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm11500-201ENSMUST00000118237 601 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm12029-201ENSMUST00000120073 832 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Mir3547-201ENSMUST00000175461 88 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm10731-201ENSMUST00000181171 448 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm5051-201ENSMUST00000204085 485 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.28■□□□□ 0.04
U2af1Q9D883 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 AC118639.2-201ENSMUST00000226289 223 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Gm10179-201ENSMUST00000086233 688 ntBASIC15.28■□□□□ 0.04
U2af1Q9D883 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
U2af1Q9D883 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
U2af1Q9D883 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
U2af1Q9D883 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC15.27■□□□□ 0.04
U2af1Q9D883 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm21092-201ENSMUST00000178995 955 ntBASIC15.27■□□□□ 0.04
U2af1Q9D883 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm7467-201ENSMUST00000185173 652 ntBASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm3508-201ENSMUST00000186012 792 ntBASIC15.27■□□□□ 0.04
U2af1Q9D883 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
U2af1Q9D883 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.27■□□□□ 0.04
U2af1Q9D883 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.27■□□□□ 0.04
U2af1Q9D883 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
U2af1Q9D883 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
U2af1Q9D883 Gm37600-201ENSMUST00000193764 3292 ntBASIC15.27■□□□□ 0.03
U2af1Q9D883 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
U2af1Q9D883 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
U2af1Q9D883 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
U2af1Q9D883 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
U2af1Q9D883 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms