Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm11700-201ENSMUST00000119409 403 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm14057-201ENSMUST00000120631 482 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm8738-201ENSMUST00000172606 329 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm29705-201ENSMUST00000212598 474 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.72□□□□□ -0.53
Sf3a3Q9D554 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Mov10-203ENSMUST00000106775 3584 ntTSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Mov10-206ENSMUST00000166979 3584 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm13736-201ENSMUST00000119272 253 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm14441-201ENSMUST00000121960 540 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Lect2-202ENSMUST00000225183 823 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Gm15823-201ENSMUST00000064305 670 ntBASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Sf3a3Q9D554 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Sf3a3Q9D554 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.7□□□□□ -0.54
Sf3a3Q9D554 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms