Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.81□□□□□ -0.36
Cfap53Q9D439 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cfap53Q9D439 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm15808-201ENSMUST00000119046 604 ntBASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.8□□□□□ -0.36
Cfap53Q9D439 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cfap53Q9D439 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm23596-201ENSMUST00000104304 132 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm26047-201ENSMUST00000157308 113 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm28937-201ENSMUST00000185413 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm29400-201ENSMUST00000187208 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm28662-201ENSMUST00000188446 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm28251-201ENSMUST00000188835 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm4857-201ENSMUST00000192718 785 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm37318-201ENSMUST00000194325 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm38017-201ENSMUST00000194768 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm37287-201ENSMUST00000195449 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm37793-201ENSMUST00000195548 695 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm26047-202ENSMUST00000198840 115 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm6450-201ENSMUST00000200896 574 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.79□□□□□ -0.36
Cfap53Q9D439 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cfap53Q9D439 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cfap53Q9D439 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms