Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.66□□□□□ -0.22
Smc3Q9CW03 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gm807-202ENSMUST00000224929 408 ntBASIC13.66□□□□□ -0.22
Smc3Q9CW03 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC13.66□□□□□ -0.22
Smc3Q9CW03 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smc3Q9CW03 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Mir8109-201ENSMUST00000184375 117 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm28937-201ENSMUST00000185413 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm29400-201ENSMUST00000187208 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm28662-201ENSMUST00000188446 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm28251-201ENSMUST00000188835 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm37318-201ENSMUST00000194325 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm38017-201ENSMUST00000194768 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm37287-201ENSMUST00000195449 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm37793-201ENSMUST00000195548 695 ntBASIC13.65□□□□□ -0.22
Smc3Q9CW03 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smc3Q9CW03 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm14127-201ENSMUST00000117906 678 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm6450-201ENSMUST00000200896 574 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Gm18065-201ENSMUST00000221395 526 ntBASIC13.64□□□□□ -0.23
Smc3Q9CW03 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smc3Q9CW03 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc3Q9CW03 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc3Q9CW03 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smc3Q9CW03 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Smc3Q9CW03 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms