Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm43547-201ENSMUST00000197729 328 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm18035-201ENSMUST00000211962 589 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm7525-201ENSMUST00000219425 454 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Capsl-202ENSMUST00000226688 739 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cldnd1Q9CQX5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Cldnd1Q9CQX5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm13039-201ENSMUST00000118638 794 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm12337-201ENSMUST00000119634 400 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm5599-201ENSMUST00000209602 788 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Cldnd1Q9CQX5 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cldnd1Q9CQX5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms