Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm37009-201ENSMUST00000193297 361 ntBASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.49□□□□□ -0.57
Cdh23Q99PF4 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Cacna2d3-208ENSMUST00000225985 918 ntBASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Cdh23Q99PF4 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 H2afy3-201ENSMUST00000151919 1112 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm38135-201ENSMUST00000195068 502 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 AC133517.1-201ENSMUST00000225825 594 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 CU025215.1-201ENSMUST00000222986 603 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm8725-201ENSMUST00000221829 1333 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdh23Q99PF4 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm5738-201ENSMUST00000206016 779 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm19228-201ENSMUST00000214030 717 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm9095-201ENSMUST00000117607 881 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm9097-201ENSMUST00000120514 880 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Gm9409-201ENSMUST00000197017 316 ntBASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Cdh23Q99PF4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms