Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm15236-201ENSMUST00000117309 379 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm12715-201ENSMUST00000121430 1128 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm14441-201ENSMUST00000121960 540 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm44967-201ENSMUST00000207047 631 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm18056-201ENSMUST00000207670 568 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm18061-201ENSMUST00000208350 562 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm18063-201ENSMUST00000208529 568 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm18052-201ENSMUST00000208750 559 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf111Q99ML9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm25668-201ENSMUST00000157700 129 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm25700-201ENSMUST00000177693 110 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm4857-201ENSMUST00000192718 785 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm17931-201ENSMUST00000208132 634 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm45224-201ENSMUST00000208203 414 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf111Q99ML9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms