Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm45224-201ENSMUST00000208203 414 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chmp1b1Q99LU0 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm12164-201ENSMUST00000121695 551 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm5706-201ENSMUST00000181525 993 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm18056-201ENSMUST00000207670 568 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm18061-201ENSMUST00000208350 562 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm18063-201ENSMUST00000208529 568 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm18052-201ENSMUST00000208750 559 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm18212-201ENSMUST00000211678 889 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chmp1b1Q99LU0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm2383-201ENSMUST00000181461 807 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm29199-201ENSMUST00000187766 775 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm17812-201ENSMUST00000204935 318 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chmp1b1Q99LU0 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms