Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Paupar-201ENSMUST00000194826 3482 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm11500-201ENSMUST00000118237 601 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm25492-201ENSMUST00000157383 129 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm37284-201ENSMUST00000193607 539 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm43380-201ENSMUST00000200421 220 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Pcdhb5Q91XZ5 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm14270-201ENSMUST00000118388 846 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm12274-201ENSMUST00000120062 385 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm12990-201ENSMUST00000120372 468 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm18059-201ENSMUST00000208073 580 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Pcdhb5Q91XZ5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.68□□□□□ -0.22
Pcdhb5Q91XZ5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms