Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gm13809-201ENSMUST00000117921 597 ntBASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gm15131-201ENSMUST00000119124 595 ntBASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Mir6546-201ENSMUST00000184460 62 ntBASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.42□□□□□ -0.26
Ddx41Q91VN6 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ddx41Q91VN6 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm19459-201ENSMUST00000176240 835 ntBASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm10774-201ENSMUST00000188689 204 ntBASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ddx41Q91VN6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm11663-201ENSMUST00000117888 290 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm15004-201ENSMUST00000119192 630 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Mir7686-201ENSMUST00000200604 57 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ddx41Q91VN6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms