Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm37287-201ENSMUST00000195449 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm37793-201ENSMUST00000195548 695 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.03□□□□□ -0.48
Trim60Q8VI40 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim60Q8VI40 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim60Q8VI40 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim60Q8VI40 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim60Q8VI40 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim60Q8VI40 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Trim60Q8VI40 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm27501-201ENSMUST00000183599 107 ntBASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.02□□□□□ -0.49
Trim60Q8VI40 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim60Q8VI40 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 BC043934-202ENSMUST00000185694 2356 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm22133-201ENSMUST00000102082 109 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.01□□□□□ -0.49
Trim60Q8VI40 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.01□□□□□ -0.49
Trim60Q8VI40 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trim60Q8VI40 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms