Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm8737-201ENSMUST00000122208 642 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm6485-201ENSMUST00000160676 439 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm23771-201ENSMUST00000178702 110 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm4654-201ENSMUST00000183305 982 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm38151-201ENSMUST00000195085 289 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr1Q8VHP6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm11783-201ENSMUST00000119549 885 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm11836-201ENSMUST00000121022 441 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm24844-201ENSMUST00000158679 127 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm3150-201ENSMUST00000166418 204 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm12407-201ENSMUST00000180219 324 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm27910-201ENSMUST00000185004 107 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm28937-201ENSMUST00000185413 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm29400-201ENSMUST00000187208 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm28662-201ENSMUST00000188446 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm28251-201ENSMUST00000188835 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm37318-201ENSMUST00000194325 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm38017-201ENSMUST00000194768 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm37287-201ENSMUST00000195449 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm37793-201ENSMUST00000195548 695 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm6450-201ENSMUST00000200896 574 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm45219-201ENSMUST00000205602 465 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm7940-201ENSMUST00000218195 769 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Snora73b-201ENSMUST00000083419 205 ntBASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cdhr1Q8VHP6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms