Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim29Q8R2Q0 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm45199-201ENSMUST00000207640 1507 ntBASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm18065-201ENSMUST00000221395 526 ntBASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim29Q8R2Q0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm37466-201ENSMUST00000195692 652 ntBASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gm7940-201ENSMUST00000218195 769 ntBASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim29Q8R2Q0 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim29Q8R2Q0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms