Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm11500-201ENSMUST00000118237 601 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm18065-201ENSMUST00000221395 526 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.87□□□□□ -0.03
Chmp7Q8R1T1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm14071-201ENSMUST00000117817 509 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm23694-201ENSMUST00000179335 110 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Mir7051-201ENSMUST00000184167 73 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm37284-201ENSMUST00000193607 539 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm16380-201ENSMUST00000077997 478 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Mir483-201ENSMUST00000093631 73 ntBASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chmp7Q8R1T1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm13022-201ENSMUST00000121181 285 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm22379-201ENSMUST00000157480 131 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm17709-201ENSMUST00000174536 1096 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm9884-201ENSMUST00000194343 1222 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm38314-201ENSMUST00000195709 625 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm45592-201ENSMUST00000209605 1043 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm18514-201ENSMUST00000218980 436 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm4811-201ENSMUST00000220879 1220 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gm25201-201ENSMUST00000083093 170 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Paupar-201ENSMUST00000194826 3482 ntBASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chmp7Q8R1T1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms