Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm13624-201ENSMUST00000120263 462 ntBASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Gm4943-201ENSMUST00000132879 424 ntBASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Gm37207-201ENSMUST00000194284 296 ntBASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Prss23os-202ENSMUST00000179361 1362 ntBASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ddx54Q8K4L0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm1826-201ENSMUST00000118646 1162 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm14113-201ENSMUST00000121399 976 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm24992-201ENSMUST00000157412 130 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm20495-201ENSMUST00000173902 235 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm6114-201ENSMUST00000182472 968 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm30055-201ENSMUST00000203175 803 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 AC107752.1-201ENSMUST00000219362 469 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm12912-201ENSMUST00000121596 1381 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm42970-201ENSMUST00000196407 1352 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.18■□□□□ 0.02
Ddx54Q8K4L0 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm8152-201ENSMUST00000120842 637 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm14441-201ENSMUST00000121960 540 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm26313-201ENSMUST00000157770 308 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm27440-201ENSMUST00000184785 107 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Gm43866-201ENSMUST00000203894 839 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ddx54Q8K4L0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms