Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm25076-201ENSMUST00000104098 132 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm26013-201ENSMUST00000104404 119 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm15207-201ENSMUST00000119259 442 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm11660-201ENSMUST00000120955 412 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm8815-201ENSMUST00000173809 620 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm29499-201ENSMUST00000189151 486 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm28329-201ENSMUST00000191208 689 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm29171-201ENSMUST00000191397 486 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm6867-201ENSMUST00000219165 425 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc17Q8CE13 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm5419-201ENSMUST00000119301 527 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm22877-201ENSMUST00000175451 105 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm17889-201ENSMUST00000198410 598 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc17Q8CE13 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc17Q8CE13 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ccdc17Q8CE13 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms