Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc38Q8CDN8 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc38Q8CDN8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc38Q8CDN8 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc38Q8CDN8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc38Q8CDN8 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm4310-201ENSMUST00000177847 889 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm28937-201ENSMUST00000185413 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm29400-201ENSMUST00000187208 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm28662-201ENSMUST00000188446 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm28251-201ENSMUST00000188835 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm37318-201ENSMUST00000194325 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm38017-201ENSMUST00000194768 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm37287-201ENSMUST00000195449 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm37793-201ENSMUST00000195548 695 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 AY036118-201ENSMUST00000200021 923 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm4157-201ENSMUST00000211647 679 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm17827-201ENSMUST00000211825 742 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc38Q8CDN8 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm13996-201ENSMUST00000118456 430 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm43179-201ENSMUST00000198797 275 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm17812-201ENSMUST00000204935 318 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm9797-202ENSMUST00000218003 294 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Gm10254-201ENSMUST00000052888 867 ntBASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccdc38Q8CDN8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms