Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm43184-201ENSMUST00000197247 542 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.32□□□□□ -0.6
SynpoQ8CC35 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.32□□□□□ -0.6
SynpoQ8CC35 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SynpoQ8CC35 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SynpoQ8CC35 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm12501-201ENSMUST00000119163 529 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Mir1943-201ENSMUST00000158276 73 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm270-201ENSMUST00000223010 976 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.31□□□□□ -0.6
SynpoQ8CC35 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SynpoQ8CC35 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Gm14058-201ENSMUST00000116082 735 ntBASIC11.3□□□□□ -0.6
SynpoQ8CC35 Gm13035-201ENSMUST00000117496 342 ntBASIC11.3□□□□□ -0.6
SynpoQ8CC35 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SynpoQ8CC35 Gm5523-201ENSMUST00000180415 997 ntBASIC11.3□□□□□ -0.6
SynpoQ8CC35 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.3□□□□□ -0.6
SynpoQ8CC35 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms