Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Gm15374-201ENSMUST00000119313 844 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Gm26047-201ENSMUST00000157308 113 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Gm19353-201ENSMUST00000184561 445 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Gm26047-202ENSMUST00000198840 115 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Gm19208-201ENSMUST00000213861 912 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Ginm1-202ENSMUST00000065124 300 ntBASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atg4aQ8C9S8 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm14193-201ENSMUST00000105067 153 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Mir7070-201ENSMUST00000183657 86 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm44008-201ENSMUST00000204345 412 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm17825-201ENSMUST00000206836 794 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 AC118639.2-201ENSMUST00000226289 223 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Btrc-209ENSMUST00000224478 2194 ntBASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.1□□□□□ -0.15
Atg4aQ8C9S8 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm6560-201ENSMUST00000198588 1591 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm21136-201ENSMUST00000186812 2575 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm6605-201ENSMUST00000031488 2574 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm37969-201ENSMUST00000195777 3409 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm22920-201ENSMUST00000102175 109 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm12165-201ENSMUST00000117047 342 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm7504-201ENSMUST00000201449 424 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Gm6905-201ENSMUST00000205729 511 ntBASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atg4aQ8C9S8 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atg4aQ8C9S8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Atg4aQ8C9S8 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Atg4aQ8C9S8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Atg4aQ8C9S8 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms