Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Aph1bQ8C7N7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Aph1bQ8C7N7 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.49□□□□□ -0.57
Aph1bQ8C7N7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Btrc-209ENSMUST00000224478 2194 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm13665-201ENSMUST00000120830 528 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm20495-201ENSMUST00000173902 235 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Rps4l-202ENSMUST00000204242 789 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm45113-201ENSMUST00000207518 165 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Aph1bQ8C7N7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm14723-201ENSMUST00000118686 215 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm14381-201ENSMUST00000122105 414 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm43184-201ENSMUST00000197247 542 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm43630-201ENSMUST00000201550 776 ntBASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Aph1bQ8C7N7 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms