Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc60Q8C4J0 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Gm43984-201ENSMUST00000204572 2864 ntBASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.83□□□□□ -0.03
Ccdc60Q8C4J0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm11500-201ENSMUST00000118237 601 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm26047-201ENSMUST00000157308 113 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm20426-201ENSMUST00000173657 440 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm10807-201ENSMUST00000177134 795 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm18827-201ENSMUST00000188341 790 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm10774-201ENSMUST00000188689 204 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Gm26047-202ENSMUST00000198840 115 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ccdc60Q8C4J0 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm9062-201ENSMUST00000117712 727 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm20495-201ENSMUST00000173902 235 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm4978-201ENSMUST00000071565 801 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gm6903-201ENSMUST00000160509 1366 ntBASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ccdc60Q8C4J0 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.81□□□□□ -0.04
Ccdc60Q8C4J0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms