Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sh3rf2Q8BZT2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm11700-201ENSMUST00000119409 403 ntBASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm23153-201ENSMUST00000175323 313 ntBASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm42518-201ENSMUST00000196277 938 ntBASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sh3rf2Q8BZT2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm12795-201ENSMUST00000117594 539 ntBASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Sh3rf2Q8BZT2 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sh3rf2Q8BZT2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms