Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Srrm4Q8BKA3 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm14058-201ENSMUST00000116082 735 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm12566-201ENSMUST00000121479 359 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm23085-201ENSMUST00000157849 293 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm9192-201ENSMUST00000183221 985 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Srrm4Q8BKA3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm7851-201ENSMUST00000117574 323 ntBASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gm10288-201ENSMUST00000084614 537 ntBASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Srrm4Q8BKA3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms