Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm7722-201ENSMUST00000120646 741 ntBASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm5706-201ENSMUST00000181525 993 ntBASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Mir6927-201ENSMUST00000184494 71 ntBASIC13.66□□□□□ -0.22
Samm50Q8BGH2 AY036118-201ENSMUST00000200021 923 ntBASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Samm50Q8BGH2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm28071-201ENSMUST00000190355 478 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm43962-201ENSMUST00000203898 190 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.65□□□□□ -0.22
Samm50Q8BGH2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
Samm50Q8BGH2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Samm50Q8BGH2 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms