Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm7593-201ENSMUST00000187246 644 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm3793-201ENSMUST00000204973 672 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Vrk1Q80X41 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Vrk1Q80X41 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm13937-201ENSMUST00000121000 988 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm28937-201ENSMUST00000185413 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm29400-201ENSMUST00000187208 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm28662-201ENSMUST00000188446 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm28251-201ENSMUST00000188835 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm37318-201ENSMUST00000194325 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm38017-201ENSMUST00000194768 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm37287-201ENSMUST00000195449 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm37793-201ENSMUST00000195548 695 ntBASIC11.15□□□□□ -0.62
Vrk1Q80X41 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Vrk1Q80X41 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.15□□□□□ -0.63
Vrk1Q80X41 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.15□□□□□ -0.63
Vrk1Q80X41 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Vrk1Q80X41 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Vrk1Q80X41 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms