Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pcdh19Q80TF3 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm7150-201ENSMUST00000122032 981 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm24844-201ENSMUST00000158679 127 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm9136-201ENSMUST00000193368 454 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm44545-201ENSMUST00000208262 746 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 AC102523.2-201ENSMUST00000227813 983 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Pcdh19Q80TF3 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm11667-201ENSMUST00000119828 486 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm21092-201ENSMUST00000178995 955 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm9645-201ENSMUST00000197131 792 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm9463-201ENSMUST00000206707 601 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm45878-201ENSMUST00000211839 241 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdh19Q80TF3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms