Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ush1gQ80T11 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.77□□□□□ -0.36
Ush1gQ80T11 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Ush1gQ80T11 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ush1gQ80T11 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm13600-201ENSMUST00000117949 744 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm14441-201ENSMUST00000121960 540 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm12407-201ENSMUST00000180219 324 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm17889-201ENSMUST00000198410 598 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Gm45120-201ENSMUST00000208880 408 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.77□□□□□ -0.37
Ush1gQ80T11 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ush1gQ80T11 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.76□□□□□ -0.37
Ush1gQ80T11 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm9192-201ENSMUST00000183221 985 ntBASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm38117-201ENSMUST00000194653 939 ntBASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.76□□□□□ -0.37
Ush1gQ80T11 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ush1gQ80T11 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.76□□□□□ -0.37
Ush1gQ80T11 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ush1gQ80T11 Gm22711-201ENSMUST00000116890 133 ntBASIC12.75□□□□□ -0.37
Ush1gQ80T11 Gm14942-201ENSMUST00000119642 336 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms