Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm23153-201ENSMUST00000175323 313 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm7593-201ENSMUST00000187246 644 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 AC159246.1-201ENSMUST00000214478 249 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 AC122305.2-201ENSMUST00000215148 834 ntBASIC10.9□□□□□ -0.66
Pif1Q80SX8 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pif1Q80SX8 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Pif1Q80SX8 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.67
Pif1Q80SX8 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC10.9□□□□□ -0.67
Pif1Q80SX8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Pif1Q80SX8 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Pif1Q80SX8 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Pif1Q80SX8 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm12579-201ENSMUST00000118040 783 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm13182-201ENSMUST00000122241 312 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm8492-201ENSMUST00000182375 987 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm27390-201ENSMUST00000184516 176 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm5714-201ENSMUST00000197343 566 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm44980-201ENSMUST00000205826 314 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 AC154806.5-202ENSMUST00000227217 1443 ntBASIC10.89□□□□□ -0.67
Pif1Q80SX8 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pif1Q80SX8 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pif1Q80SX8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms