Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Snrnp40Q6PE01 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm5434-202ENSMUST00000222384 1451 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm5434-201ENSMUST00000071825 1451 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm12712-201ENSMUST00000120676 801 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm16030-201ENSMUST00000159098 603 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm9507-202ENSMUST00000180157 654 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Mir6941-201ENSMUST00000184711 59 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 BC106175-202ENSMUST00000219344 1213 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gm8894-201ENSMUST00000074642 666 ntBASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Snrnp40Q6PE01 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Mir671-201ENSMUST00000102432 98 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Mir453-201ENSMUST00000104732 82 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Mir1905-201ENSMUST00000122779 82 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm37284-201ENSMUST00000193607 539 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Gm29763-201ENSMUST00000205306 616 ntBASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Snrnp40Q6PE01 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 126.6 ms