Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rnf220Q6PDX6 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rnf220Q6PDX6 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Gm43339-201ENSMUST00000200032 1606 ntBASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Rnf220Q6PDX6 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm12490-201ENSMUST00000120255 560 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm27839-201ENSMUST00000184242 106 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm7561-201ENSMUST00000211203 886 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Nln-205ENSMUST00000224945 2486 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Rnf220Q6PDX6 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms