Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm22323-201ENSMUST00000103832 109 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm26286-201ENSMUST00000104166 134 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm25668-201ENSMUST00000157700 129 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm37259-201ENSMUST00000193903 849 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm807-202ENSMUST00000224929 408 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Krt39Q6IFX4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.83□□□□□ -0.35
Krt39Q6IFX4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Krt39Q6IFX4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Krt39Q6IFX4 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Krt39Q6IFX4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm14109-201ENSMUST00000118814 309 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm27046-201ENSMUST00000182160 463 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Gm43962-201ENSMUST00000203898 190 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Krt39Q6IFX4 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms