Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sycp1Q62209 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sycp1Q62209 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sycp1Q62209 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sycp1Q62209 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sycp1Q62209 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sycp1Q62209 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sycp1Q62209 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Sycp1Q62209 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.1□□□□□ -0.31
Sycp1Q62209 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Sycp1Q62209 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm28450-201ENSMUST00000187349 638 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm18730-201ENSMUST00000218038 343 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.09□□□□□ -0.31
Sycp1Q62209 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sycp1Q62209 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sycp1Q62209 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.08□□□□□ -0.31
Sycp1Q62209 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 AC108858.2-201ENSMUST00000228186 1425 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm26286-201ENSMUST00000104166 134 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm14028-201ENSMUST00000117434 479 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm28686-201ENSMUST00000187404 609 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sycp1Q62209 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.08□□□□□ -0.32
Sycp1Q62209 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sycp1Q62209 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sycp1Q62209 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sycp1Q62209 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sycp1Q62209 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms