Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gli3Q61602 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.29■□□□□ 0.04
Gli3Q61602 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gli3Q61602 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm14231-201ENSMUST00000120090 592 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC15.28■□□□□ 0.04
Gli3Q61602 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm6686-201ENSMUST00000178455 258 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm45225-201ENSMUST00000206852 1139 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm25483-201ENSMUST00000083224 227 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm46339-201ENSMUST00000222720 3539 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gli3Q61602 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm13688-201ENSMUST00000121557 608 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Gm15570-201ENSMUST00000122093 625 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Gm15599-201ENSMUST00000122283 1345 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm15664-201ENSMUST00000160167 184 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm4866-201ENSMUST00000197408 589 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC15.28■□□□□ 0.04
Gli3Q61602 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC15.28■□□□□ 0.04
Gli3Q61602 AC161374.2-201ENSMUST00000223662 596 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 AC134793.1-202ENSMUST00000227444 803 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gli3Q61602 Elobl-202ENSMUST00000082339 300 ntBASIC15.28■□□□□ 0.04
Gli3Q61602 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.27■□□□□ 0.04
Gli3Q61602 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gli3Q61602 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC15.27■□□□□ 0.03
Gli3Q61602 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Gm12377-201ENSMUST00000118656 252 ntBASIC15.27■□□□□ 0.03
Gli3Q61602 Gm20474-201ENSMUST00000180089 596 ntBASIC15.27■□□□□ 0.03
Gli3Q61602 Mir8104-201ENSMUST00000185165 101 ntBASIC15.27■□□□□ 0.03
Gli3Q61602 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC15.27■□□□□ 0.03
Gli3Q61602 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Gli3Q61602 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.27■□□□□ 0.03
Gli3Q61602 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gli3Q61602 Olfr160-202ENSMUST00000211952 3492 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Gli3Q61602 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Klf10-203ENSMUST00000227920 2144 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm7790-201ENSMUST00000118716 1310 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm24066-201ENSMUST00000104515 131 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC15.26■□□□□ 0.03
Gli3Q61602 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Gli3Q61602 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC15.26■□□□□ 0.03
Gli3Q61602 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm26532-201ENSMUST00000180630 690 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Gm18299-201ENSMUST00000192026 636 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Ighv1-8-201ENSMUST00000192236 293 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC15.26■□□□□ 0.03
Gli3Q61602 Gm33080-201ENSMUST00000205429 172 ntBASIC15.26■□□□□ 0.03
Gli3Q61602 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 197.7 ms