Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Gm18201-201ENSMUST00000174735 875 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm18595-201ENSMUST00000175736 1068 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm29747-201ENSMUST00000194764 585 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm42655-201ENSMUST00000202782 1134 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 Gm45610-201ENSMUST00000209227 784 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 CT025561.1-201ENSMUST00000214972 674 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.79□□□□□ -0.36
Cln3Q61124 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Cln3Q61124 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cln3Q61124 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Cln3Q61124 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cln3Q61124 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm14213-201ENSMUST00000119778 768 ntBASIC12.78□□□□□ -0.36
Cln3Q61124 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm22146-201ENSMUST00000157397 288 ntBASIC12.78□□□□□ -0.36
Cln3Q61124 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm4862-201ENSMUST00000170405 438 ntBASIC12.78□□□□□ -0.36
Cln3Q61124 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.78□□□□□ -0.36
Cln3Q61124 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Cln3Q61124 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.78□□□□□ -0.36
Cln3Q61124 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cln3Q61124 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.78□□□□□ -0.36
Cln3Q61124 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.77□□□□□ -0.36
Cln3Q61124 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cln3Q61124 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.77□□□□□ -0.36
Cln3Q61124 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cln3Q61124 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.77□□□□□ -0.37
Cln3Q61124 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cln3Q61124 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cln3Q61124 Gm25053-201ENSMUST00000103982 133 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm25922-201ENSMUST00000104281 130 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.77□□□□□ -0.37
Cln3Q61124 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.77□□□□□ -0.37
Cln3Q61124 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cln3Q61124 Gm11354-201ENSMUST00000121974 422 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.77□□□□□ -0.37
Cln3Q61124 Gm24679-201ENSMUST00000158762 111 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cln3Q61124 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm5621-201ENSMUST00000187303 640 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm28833-201ENSMUST00000189671 559 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm25053-202ENSMUST00000199731 132 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 Gm43671-201ENSMUST00000200422 433 ntBASIC12.77□□□□□ -0.37
Cln3Q61124 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms