Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
R3hdm4Q4VBF2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
R3hdm4Q4VBF2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm18753-201ENSMUST00000201000 566 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm44506-201ENSMUST00000206278 965 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm10254-201ENSMUST00000052888 867 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
R3hdm4Q4VBF2 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm16166-201ENSMUST00000118291 787 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm11836-201ENSMUST00000121022 441 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm4726-201ENSMUST00000135604 736 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm6019-201ENSMUST00000148369 736 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm26047-201ENSMUST00000157308 113 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Mir8115-201ENSMUST00000184992 119 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm26047-202ENSMUST00000198840 115 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
R3hdm4Q4VBF2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms