Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC9.93□□□□□ -0.82
Znf48Q3US17 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm18916-201ENSMUST00000198264 1246 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.93□□□□□ -0.82
Znf48Q3US17 AC134254.4-201ENSMUST00000223086 370 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 AC113031.8-201ENSMUST00000227856 631 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.93□□□□□ -0.82
Znf48Q3US17 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Gm37737-201ENSMUST00000195013 1638 ntBASIC9.93□□□□□ -0.82
Znf48Q3US17 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Znf48Q3US17 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm44775-201ENSMUST00000207266 1456 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Snord83b-201ENSMUST00000104546 94 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm8215-201ENSMUST00000120627 990 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm14665-201ENSMUST00000122294 557 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm11978-201ENSMUST00000122315 466 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm9211-201ENSMUST00000182882 975 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm28011-201ENSMUST00000184097 175 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm19030-201ENSMUST00000194947 552 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm45224-201ENSMUST00000208203 414 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm45770-201ENSMUST00000212105 616 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.92□□□□□ -0.82
Znf48Q3US17 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm8712-201ENSMUST00000221090 701 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Gm22058-201ENSMUST00000083393 310 ntBASIC9.92□□□□□ -0.82
Znf48Q3US17 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Znf48Q3US17 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Znf48Q3US17 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms