Protein–RNA interactions for Protein: Q3TJD7

Pdlim7, PDZ and LIM domain protein 7, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim7Q3TJD7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pdlim7Q3TJD7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Pdlim7Q3TJD7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Gm25226-201ENSMUST00000158198 123 ntBASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Gm45527-201ENSMUST00000211052 774 ntBASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pdlim7Q3TJD7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Mir453-201ENSMUST00000104732 82 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm14234-201ENSMUST00000119539 845 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm16219-201ENSMUST00000120096 274 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm15197-201ENSMUST00000120526 478 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm6114-201ENSMUST00000182472 968 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm26976-201ENSMUST00000182929 908 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Mir7051-201ENSMUST00000184167 73 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm42511-201ENSMUST00000196160 234 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm2594-201ENSMUST00000214774 742 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm7525-201ENSMUST00000219425 454 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.01□□□□□ -0.33
Pdlim7Q3TJD7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms