Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gm13296-201ENSMUST00000117854 997 ntBASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gm45224-201ENSMUST00000208203 414 ntBASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cul4aQ3TCH7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cul4aQ3TCH7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cul4aQ3TCH7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms