Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm18561-201ENSMUST00000206027 804 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm30671-201ENSMUST00000214898 318 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm6722-201ENSMUST00000221586 390 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.6□□□□□ -0.39
Col9a2Q07643 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Col9a2Q07643 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col9a2Q07643 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm8111-201ENSMUST00000117659 987 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm14395-201ENSMUST00000120494 563 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm25072-201ENSMUST00000175233 235 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm17877-201ENSMUST00000192578 814 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm43163-201ENSMUST00000196571 442 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm39288-201ENSMUST00000210554 446 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col9a2Q07643 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.59□□□□□ -0.39
Col9a2Q07643 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col9a2Q07643 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a2Q07643 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col9a2Q07643 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.58□□□□□ -0.4
Col9a2Q07643 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.58□□□□□ -0.4
Col9a2Q07643 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.58□□□□□ -0.4
Col9a2Q07643 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col9a2Q07643 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col9a2Q07643 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms