Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44216-201ENSMUST00000203942 157 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC11.84□□□□□ -0.51
Col9a1Q05722 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.84□□□□□ -0.51
Col9a1Q05722 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC11.84□□□□□ -0.51
Col9a1Q05722 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Gm8615-201ENSMUST00000025307 771 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Col9a1Q05722 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.84□□□□□ -0.51
Col9a1Q05722 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Col9a1Q05722 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Col9a1Q05722 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.83□□□□□ -0.51
Col9a1Q05722 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC11.83□□□□□ -0.51
Col9a1Q05722 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.83□□□□□ -0.51
Col9a1Q05722 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm8019-201ENSMUST00000119317 587 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm24844-201ENSMUST00000158679 127 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm3052-201ENSMUST00000186409 829 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm18800-202ENSMUST00000188688 1105 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm7727-201ENSMUST00000219830 671 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 CT025618.1-201ENSMUST00000227409 1279 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.83□□□□□ -0.52
Col9a1Q05722 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Col9a1Q05722 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Col9a1Q05722 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm14388-201ENSMUST00000118119 477 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm11993-201ENSMUST00000121861 820 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm14006-201ENSMUST00000122132 981 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC11.82□□□□□ -0.52
Col9a1Q05722 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Col9a1Q05722 Gm26401-201ENSMUST00000158502 76 ntBASIC11.82□□□□□ -0.52
Col9a1Q05722 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms