Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm5850-201ENSMUST00000192923 1206 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm38158-201ENSMUST00000194617 339 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Gm5950-201ENSMUST00000213337 772 ntBASIC9.95□□□□□ -0.82
Smn1P97801 AC154252.2-201ENSMUST00000223593 767 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smn1P97801 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Smn1P97801 AC114008.2-201ENSMUST00000227699 1347 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm13127-201ENSMUST00000118978 1389 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Gm26660-202ENSMUST00000223620 4112 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 AC167669.2-201ENSMUST00000224417 1620 ntBASIC9.95□□□□□ -0.82
Smn1P97801 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smn1P97801 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Smn1P97801 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.95□□□□□ -0.82
Smn1P97801 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Smn1P97801 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Smn1P97801 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Smn1P97801 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Gm22018-201ENSMUST00000104357 131 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Gm11989-201ENSMUST00000117240 672 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Gm11362-201ENSMUST00000118838 850 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC9.94□□□□□ -0.82
Smn1P97801 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Smn1P97801 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.94□□□□□ -0.82
Smn1P97801 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.94□□□□□ -0.82
Smn1P97801 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Smn1P97801 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Smn1P97801 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Smn1P97801 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.94□□□□□ -0.82
Smn1P97801 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC9.94□□□□□ -0.82
Smn1P97801 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Smn1P97801 Gm6157-201ENSMUST00000199935 1897 ntBASIC9.93□□□□□ -0.82
Smn1P97801 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.93□□□□□ -0.82
Smn1P97801 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Smn1P97801 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.93□□□□□ -0.82
Smn1P97801 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.93□□□□□ -0.82
Smn1P97801 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Smn1P97801 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms