Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SgcbP82349 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC10.45□□□□□ -0.74
SgcbP82349 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Gm45657-201ENSMUST00000211318 1349 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SgcbP82349 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Gm649-201ENSMUST00000117284 1054 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Gm7851-201ENSMUST00000117574 323 ntBASIC10.44□□□□□ -0.74
SgcbP82349 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.44□□□□□ -0.74
SgcbP82349 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.44□□□□□ -0.74
SgcbP82349 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.44□□□□□ -0.74
SgcbP82349 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Gm29747-201ENSMUST00000194764 585 ntBASIC10.44□□□□□ -0.74
SgcbP82349 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.44□□□□□ -0.74
SgcbP82349 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Nsd1-205ENSMUST00000224693 852 ntBASIC10.44□□□□□ -0.74
SgcbP82349 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SgcbP82349 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
SgcbP82349 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.44□□□□□ -0.74
SgcbP82349 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.44□□□□□ -0.74
SgcbP82349 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
SgcbP82349 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SgcbP82349 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
SgcbP82349 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SgcbP82349 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gm11331-201ENSMUST00000119764 288 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm8199-201ENSMUST00000121323 823 ntBASIC10.43□□□□□ -0.74
SgcbP82349 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.43□□□□□ -0.74
SgcbP82349 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.43□□□□□ -0.74
SgcbP82349 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
SgcbP82349 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gm28937-201ENSMUST00000185413 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm29400-201ENSMUST00000187208 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm28662-201ENSMUST00000188446 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm28251-201ENSMUST00000188835 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
SgcbP82349 Gm37318-201ENSMUST00000194325 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm38017-201ENSMUST00000194768 695 ntBASIC10.43□□□□□ -0.74
SgcbP82349 Gm37287-201ENSMUST00000195449 695 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms