Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcdP82347 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcdP82347 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.85□□□□□ -0.67
SgcdP82347 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SgcdP82347 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
SgcdP82347 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcdP82347 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.85□□□□□ -0.67
SgcdP82347 Rps4l-202ENSMUST00000204242 789 ntBASIC10.85□□□□□ -0.67
SgcdP82347 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Gm7046-201ENSMUST00000221351 977 ntBASIC10.85□□□□□ -0.67
SgcdP82347 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SgcdP82347 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SgcdP82347 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SgcdP82347 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Dyrk1a-203ENSMUST00000122284 2356 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.85□□□□□ -0.67
SgcdP82347 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SgcdP82347 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SgcdP82347 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SgcdP82347 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.84□□□□□ -0.67
SgcdP82347 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcdP82347 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SgcdP82347 Gm22323-201ENSMUST00000103832 109 ntBASIC10.84□□□□□ -0.67
SgcdP82347 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.84□□□□□ -0.67
SgcdP82347 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.84□□□□□ -0.67
SgcdP82347 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Gm38092-201ENSMUST00000195600 653 ntBASIC10.84□□□□□ -0.67
SgcdP82347 Nsd1-205ENSMUST00000224693 852 ntBASIC10.84□□□□□ -0.67
SgcdP82347 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.84□□□□□ -0.67
SgcdP82347 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.84□□□□□ -0.67
SgcdP82347 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SgcdP82347 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SgcdP82347 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
SgcdP82347 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
SgcdP82347 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SgcdP82347 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.83□□□□□ -0.68
SgcdP82347 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.83□□□□□ -0.68
SgcdP82347 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SgcdP82347 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms